Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001506GS homeobox 1. (243 aa)    
Predicted Functional Partners:
ENSACIP00000028292
General transcription factor IIIA, b.
    
 
 0.709
ENSACIP00000024368
General transcription factor IIIAa.
    
 
 0.708
ENSACIP00000028784
Transgelin 3b.
      
 0.647
ENSACIP00000027992
Shisa family member 2b.
      
 0.623
ENSACIP00000028191
WASP family member 3b.
      
 0.608
ENSACIP00000021731
Pre-B-cell leukemia transcription factor 4.
    
 0.586
ENSACIP00000002009
Pre-B-cell leukemia homeobox 2.
    
 0.571
ENSACIP00000002671
Si:ch211-236k19.2.
    
 0.561
ENSACIP00000002685
Uncharacterized protein.
    
 0.561
ENSACIP00000006344
LIM homeobox 6.
    
 0.561
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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