Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001508Four-jointed box kinase 1. (426 aa)    
Predicted Functional Partners:
ENSACIP00000028851
FAT atypical cadherin 1a.
   
 0.985
ENSACIP00000005164
FAT atypical cadherin 3a.
   
 0.984
ENSACIP00000014437
FAT atypical cadherin 3b.
   
 0.984
ENSACIP00000003037
FAT atypical cadherin 2.
   
 0.982
FAT4
FAT atypical cadherin 4.
   
 0.912
ENSACIP00000005882
Uncharacterized protein.
   
 0.912
ENSACIP00000005904
Si:dkey-1m11.6.
   
 0.912
ENSACIP00000004295
Dachsous cadherin-related 1a.
   
 0.892
ENSACIP00000011257
Dachsous cadherin-related 1b.
   
 0.892
ENSACIP00000018707
Uncharacterized protein.
   
 0.892
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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