Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001510Cytochrome b reductase 1. (278 aa)    
Predicted Functional Partners:
ENSACIP00000004565
Chromodomain protein, Y-like.
    
   0.836
CDYL2
Chromodomain Y like 2.
    
   0.836
ENSACIP00000023294
Mesoderm induction early response 1, family member 3 b.
    
   0.831
ENSACIP00000024700
Mesoderm induction early response 1b, transcriptional regulator.
    
   0.831
ENSACIP00000021296
Splicing factor 3b, subunit 3.
     
  0.653
ENSACIP00000007131
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
      
 0.640
ENSACIP00000022110
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
      
 0.640
ENSACIP00000013688
Ig-like domain-containing protein; Belongs to the MHC class I family.
      
 0.636
ENSACIP00000025916
Ig-like domain-containing protein; Belongs to the MHC class I family.
      
 0.636
ENSACIP00000023217
Solute carrier family 46 member 1.
   
  
 0.612
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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