STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001531Regulatory factor X, 5. (629 aa)    
Predicted Functional Partners:
ENSACIP00000030392
Regulatory factor X-associated protein.
    
 0.996
ENSACIP00000031536
Regulatory factor X-associated ankyrin-containing protein.
    
 0.996
ENSACIP00000022367
NACHT domain-containing protein.
    
 0.981
ENSACIP00000002914
Checkpoint kinase 2.
   
 0.859
ENSACIP00000004575
Ankyrin repeat, family A (RFXANK-like), 2.
    
 0.792
ENSACIP00000006953
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.758
ENSACIP00000021680
NACHT domain-containing protein.
    
 0.690
ENSACIP00000005118
Doublecortin-like kinase 1b.
     
 0.642
ENSACIP00000030399
Doublecortin-like kinase 1a.
     
 0.642
ENSACIP00000000172
Uncharacterized protein.
    
 0.617
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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