Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCF15Transcription factor 15. (182 aa)    
Predicted Functional Partners:
ENSACIP00000017079
Mesenchyme homeobox 1.
    
 
 0.585
ENSACIP00000002913
Transcription factor 12.
    
 0.573
ENSACIP00000019127
Transcription factor 3b.
    
 0.573
ENSACIP00000019510
BHLH domain-containing protein.
    
 0.573
ENSACIP00000023074
Transcription factor 3a.
    
 0.573
TCF4
Transcription factor 4.
    
 0.573
ENSACIP00000019323
T-box transcription factor 6.
    
 0.513
ENSACIP00000010482
LIM-domain binding 1b.
    
 0.495
ENSACIP00000022556
LIM domain binding 2a.
    
 0.495
ENSACIP00000029076
LIM domain binding 1a.
    
 0.495
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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