Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001547Ddb1 and cul4 associated factor 17. (381 aa)    
Predicted Functional Partners:
ENSACIP00000010978
DDB1 and CUL4 associated factor 8.
     
 0.916
ENSACIP00000017103
Cullin 4B; Belongs to the cullin family.
    
 0.911
ENSACIP00000029255
Cullin 4A; Belongs to the cullin family.
    
 0.911
ENSACIP00000026665
Damage-specific DNA binding protein 1.
    
 0.908
ENSACIP00000003941
Ddb1 and cul4 associated factor 13.
     
 0.900
ENSACIP00000015748
DET1 and DDB1 associated 1.
    
 0.870
DDA1
DET1 and DDB1 associated 1.
    
 0.870
ENSACIP00000013731
WD and tetratricopeptide repeats 1.
     
 0.819
ENSACIP00000014387
WD repeat domain 32.
     
 0.812
ENSACIP00000015513
Ddb1 and cul4 associated factor 5.
     
  0.812
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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