STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001549Vesicle (multivesicular body) trafficking 1. (233 aa)    
Predicted Functional Partners:
ENSACIP00000005423
Charged multivesicular body protein 5a.
   
 0.992
ENSACIP00000015766
Uncharacterized protein.
   
 0.992
ENSACIP00000022547
Charged multivesicular body protein 5b.
   
 0.992
ENSACIP00000015268
Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.
   
 0.988
ENSACIP00000016934
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.988
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 0.988
ENSACIP00000015207
Charged multivesicular body protein 1A.
   
 0.987
ENSACIP00000017343
Uncharacterized protein.
   
 0.987
ENSACIP00000017372
Chromatin modifying protein 1B.
   
 0.987
ENSACIP00000006749
IST1 factor associated with ESCRT-III.
   
 
 0.985
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.