Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001550La ribonucleoprotein domain family, member 4Aa. (754 aa)    
Predicted Functional Partners:
ENSACIP00000022059
Receptor for activated C kinase 1.
    
 
 0.818
ENSACIP00000000988
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.600
ENSACIP00000006359
Ataxin 2.
   
 
 0.583
ENSACIP00000004984
Calponin-homology (CH) domain-containing protein.
    
   0.559
ENSACIP00000007732
Uncharacterized protein.
    
   0.559
ENSACIP00000012525
Uncharacterized protein.
    
   0.559
FLNB
Filamin B.
    
   0.559
ENSACIP00000024664
Filamin C, gamma a (actin binding protein 280).
    
   0.559
WDR31
WD repeat domain 31.
    
   0.539
ENSACIP00000017024
Malignant T-cell-amplified sequence.
    
 
 0.535
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.