Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001569Uncharacterized protein. (308 aa)    
Predicted Functional Partners:
ENSACIP00000024164
Nescient helix loop helix 2.
   
 
 0.491
ENSACIP00000000988
Ubiquitin carboxyl-terminal hydrolase.
    
   0.480
ENSACIP00000031163
POU domain protein.
   
 
 0.443
ENSACIP00000019059
F-box and WD repeat domain containing 11b.
    
 
 0.433
ENSACIP00000012861
Ventral anterior homeobox 2.
      
 0.426
ENSACIP00000000853
REST corepressor 2.
    
 0.407
ENSACIP00000022596
REST corepressor 3.
    
 0.407
ENSACIP00000029331
REST corepressor 1.
    
 0.407
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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