STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001589Cyclin-dependent kinase 13. (1290 aa)    
Predicted Functional Partners:
ENSACIP00000007706
Cyclin K; Belongs to the cyclin family.
    
 0.978
ENSACIP00000020650
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.973
ENSACIP00000027506
Transcription elongation factor SPT5.
    
 0.967
ENSACIP00000006575
Cyclin T1; Belongs to the cyclin family.
   
 0.901
CCNT2
Cyclin T2; Belongs to the cyclin family.
   
 0.901
ENSACIP00000024300
Cyclin T2b.
   
 0.901
ENSACIP00000024332
Cyclin T2b; Belongs to the cyclin family.
   
 0.901
ENSACIP00000007889
Cyclin Q; Belongs to the cyclin family.
    
 0.900
ENSACIP00000026665
Damage-specific DNA binding protein 1.
    
 
 0.896
ENSACIP00000018421
UBX domain-containing protein 7.
   
 0.865
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.