Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACIP00000001590Coiled-coil domain containing 126. (159 aa)    
Predicted Functional Partners:
ENSACIP00000008695
WD repeat domain 17.
      
 0.894
ENSACIP00000009047
Potassium inwardly-rectifying channel, subfamily J, member 14.
      
 0.738
ENSACIP00000000196
Abhydrolase domain containing 13.
      
 0.732
ENSACIP00000020939
Divergent protein kinase domain 1Ab.
      
 0.732
LRIT2
Leucine rich repeat, Ig-like and transmembrane domains 2.
      
 0.703
ENSACIP00000026158
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 2.
      
 0.703
ENSACIP00000010218
Family with sequence similarity 169 member B.
      
 0.690
ENSACIP00000010072
Dpy-19 like C-mannosyltransferase 3.
      
 0.689
ENSACIP00000000203
Ankyrin repeat domain 33Ab.
      
 0.633
ENSACIP00000023185
Ankyrin repeat domain 33Aa.
      
 0.633
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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