STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIMP2TIMP metallopeptidase inhibitor 2. (220 aa)    
Predicted Functional Partners:
ENSACIP00000005065
Matrix metallopeptidase 9.
   
 0.965
ENSACIP00000008104
Matrix metallopeptidase 14b (membrane-inserted).
    
 0.961
ENSACIP00000018412
Matrix metallopeptidase 15b.
    
 0.954
ENSACIP00000004937
Matrix metallopeptidase 2.
   
 0.914
ENSACIP00000003990
ZnMc domain-containing protein.
   
 0.870
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 
 0.859
ENSACIP00000013302
ZnMc domain-containing protein.
   
 0.845
ENSACIP00000027270
Matrix metallopeptidase 13b.
   
 0.828
ENSACIP00000027413
Matrix metallopeptidase 20a (enamelysin).
   
 0.828
ENSACIP00000027369
Matrix metallopeptidase 20b (enamelysin).
   
 0.815
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.