Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
ENSACIP00000001594Exonuclease domain-containing protein. (272 aa)    
Predicted Functional Partners:
ENSACIP00000001101
Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily.
    
 
 0.825
ENSACIP00000019439
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
      
 0.768
ENSACIP00000005504
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
    
   0.749
ENSACIP00000031137
Exosome component 5.
   
 0.704
ENSACIP00000010073
Stem-loop binding protein 2.
    
 
 0.652
ENSACIP00000028825
Stem-loop binding protein.
    
 
 0.652
ENSACIP00000024341
WD repeat domain containing 83.
      
 0.641
ENSACIP00000030435
Small fragment nuclease.
   
  
 0.637
ENSACIP00000005256
Exoribonuclease 1.
   
  
 0.625
ENSACIP00000005011
DnaJ (Hsp40) homolog, subfamily C, member 12.
    
   0.607
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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