STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001594Exonuclease domain-containing protein. (272 aa)    
Predicted Functional Partners:
ENSACIP00000010073
Stem-loop binding protein 2.
   
 
 0.747
ENSACIP00000028825
Stem-loop binding protein.
   
 
 0.747
ENSACIP00000031137
Exosome component 5.
   
 0.715
ENSACIP00000001101
Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily.
    
 
 0.682
ENSACIP00000011985
Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
     
 0.673
ENSACIP00000021175
Ribosomal protein L30.
     
 0.672
ENSACIP00000021416
Exosome component 6.
   
 0.671
ENSACIP00000023056
Exosome component 4.
   
 0.671
ENSACIP00000004794
Ribosomal protein L4.
    
 0.666
ENSACIP00000026106
Ribosomal protein L8.
   
 
  0.640
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.