Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001598Smoothelin b. (412 aa)    
Predicted Functional Partners:
ENSACIP00000011462
Uncharacterized protein.
      
 0.638
ENSACIP00000018307
Lysine (K)-specific demethylase 6B, b.
      
 0.628
ENSACIP00000014974
Family with sequence similarity 171 member A1.
      
 0.605
ENSACIP00000016789
Family with sequence similarity 171 member A2b.
      
 0.605
ENSACIP00000012746
Uncharacterized protein.
    
   0.566
ENSACIP00000019986
Rap guanine nucleotide exchange factor (GEF) 1b.
    
   0.564
ENSACIP00000000284
Zgc:153115.
      
 0.553
ENSACIP00000014037
Cysteine-serine-rich nuclear protein 1a.
      
 0.535
ENSACIP00000024951
Cysteine-serine-rich nuclear protein 1b.
      
 0.535
ENSACIP00000011338
Si:ch73-62l21.1.
      
 0.481
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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