STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001609UBIQUITIN_CONJUGAT_2 domain-containing protein. (146 aa)    
Predicted Functional Partners:
ENSACIP00000022928
Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.987
ENSACIP00000010389
Uncharacterized protein.
   
 0.943
ENSACIP00000006595
Helicase-like transcription factor.
    
 0.942
ENSACIP00000007861
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.941
ENSACIP00000004126
Ribosomal protein S27a.
   
 0.934
ENSACIP00000008399
REV3 like, DNA directed polymerase zeta catalytic subunit.
    
 
 0.913
ENSACIP00000002911
Polymerase (DNA directed), eta.
    
 
 0.906
ENSACIP00000017182
Tumor protein p53 binding protein, 1.
    
 0.861
ENSACIP00000017021
Phospholipase A2.
     
  0.859
ENSACIP00000002072
Polymerase (DNA-directed), delta 3, accessory subunit.
    
 0.856
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.