Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
ENSACIP00000001619CDC42 small effector 1. (75 aa)    
Predicted Functional Partners:
ENSACIP00000011618
CDC42 effector protein (Rho GTPase binding) 4b.
      
 0.805
CDC42
Cell division cycle 42.
    
 
 0.743
ENSACIP00000021838
PNPLA domain-containing protein.
      
 0.743
ENSACIP00000025287
Uncharacterized protein.
    
 
 0.743
ENSACIP00000021094
FLII actin remodeling protein.
      
 0.701
ENSACIP00000009636
Transmembrane p24 trafficking protein 2.
      
 0.659
ENSACIP00000004151
BAI1-associated protein 2-like 1a.
      
 0.638
ENSACIP00000009158
BAI1-associated protein 2-like 1b.
      
 0.638
ENSACIP00000002667
CDC42 effector protein (Rho GTPase binding) 3.
      
 0.636
ENSACIP00000013256
CDC42 effector protein (Rho GTPase binding) 4a.
      
 0.636
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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