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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001632Sidoreflexin. (320 aa)    
Predicted Functional Partners:
ENSACIP00000003890
RAB11a, member RAS oncogene family.
    
 0.683
ENSACIP00000022375
RAB11a, member RAS oncogene family, like.
    
 0.683
ENSACIP00000025336
Uncharacterized protein.
    
 0.683
ENSACIP00000031550
RAB11B, member RAS oncogene family, a.
    
 0.683
ENSACIP00000031552
Uncharacterized protein.
    
 0.683
ENSACIP00000022390
RAB25, member RAS oncogene family b.
    
 0.652
ENSACIP00000025565
RAB25, member RAS oncogene family a.
    
 0.652
ENSACIP00000000780
RAB, member of RAS oncogene family-like 2.
    
 0.620
ENSACIP00000020159
Transmembrane protein 192.
   
  0.554
ENSACIP00000000393
Uncharacterized protein.
    
  0.522
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.