STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001637Rhomboid domain-containing protein. (371 aa)    
Predicted Functional Partners:
ENSACIP00000019227
PTEN induced kinase 1.
    
 
 0.851
ENSACIP00000002490
YME1-like 1a; Belongs to the AAA ATPase family.
  
 
 0.767
ENSACIP00000010420
YME1-like 1b; Belongs to the AAA ATPase family.
  
 
 0.767
ENSACIP00000001327
Stomatin (EPB72)-like 2.
  
 0.737
ENSACIP00000021870
Uncharacterized protein.
  
 0.737
ENSACIP00000016164
OPA1 mitochondrial dynamin like GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.701
ENSACIP00000008416
Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.
      
 0.682
ENSACIP00000027168
SPG7 matrix AAA peptidase subunit, paraplegin.
  
 
 0.670
ENSACIP00000030036
Cytochrome c oxidase assembly homolog 11 (yeast).
  
  
 0.659
ENSACIP00000025242
Prohibitin.
  
 0.645
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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