Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001661CCAAT enhancer binding protein gamma. (164 aa)    
Predicted Functional Partners:
ENSACIP00000021337
DNA-damage-inducible transcript 3.
   
 0.985
ENSACIP00000005536
Activating transcription factor 4a.
   
 0.984
ENSACIP00000016107
CCAAT enhancer binding protein beta.
    
 0.969
ENSACIP00000010497
Activating transcription factor 4b.
   
 0.957
ENSACIP00000008596
Activating transcription factor 5b.
   
 0.953
ENSACIP00000013092
Activating transcription factor 5a.
   
 0.953
ENSACIP00000019104
Activating transcription factor 3.
   
 0.938
ENSACIP00000022367
NACHT domain-containing protein.
     
  0.865
ENSACIP00000027317
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.865
ENSACIP00000005500
V-fos FBJ murine osteosarcoma viral oncogene homolog Ab.
    
 0.847
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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