STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001664Uncharacterized protein. (270 aa)    
Predicted Functional Partners:
ENSACIP00000005065
Matrix metallopeptidase 9.
    
 0.698
ENSACIP00000003515
Collagen, type XXII, alpha 1.
 
  
  0.482
COL8A1
Collagen type VIII alpha 1 chain.
 
  
  0.481
ENSACIP00000016982
Nucleolin.
    
 
 0.478
ENSACIP00000028313
Uncharacterized protein.
    
 
 0.478
ENSACIP00000003588
Collagen, type VIII, alpha 2.
 
  
  0.469
ENSACIP00000003921
Procollagen, type IX, alpha 2.
 
  
  0.469
ENSACIP00000020240
Collagen, type X, alpha 1a.
 
  
  0.467
ENSACIP00000031190
Fibrillar collagen NC1 domain-containing protein.
 
 
  0.460
ENSACIP00000024832
Fibronectin 1b.
   
 0.459
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.