STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001664Uncharacterized protein. (270 aa)    
Predicted Functional Partners:
ENSACIP00000005065
Matrix metallopeptidase 9.
    
 0.661
ENSACIP00000016982
Nucleolin.
    
 
 0.602
ENSACIP00000028313
Uncharacterized protein.
    
 
 0.602
RBM20
RNA binding motif protein 20.
    
 0.597
ENSACIP00000007540
Integrin, alpha V; Belongs to the integrin alpha chain family.
    
 0.594
ENSACIP00000018363
Integrin, alpha 5 (fibronectin receptor, alpha polypeptide); Belongs to the integrin alpha chain family.
    
 0.594
ENSACIP00000018796
Integrin, alpha 8; Belongs to the integrin alpha chain family.
    
 0.594
ENSACIP00000022581
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.594
ENSACIP00000025623
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.594
ENSACIP00000004506
Integrin beta.
    
 0.592
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.