STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001680Si:dkey-28o19.1. (595 aa)    
Predicted Functional Partners:
ENSACIP00000001574
Uncharacterized protein.
    
  0.769
ENSACIP00000024340
Uncharacterized protein.
    
  0.769
ENSACIP00000011066
Vav 3 guanine nucleotide exchange factor b.
    
 0.654
ENSACIP00000027250
Netrin g1a.
    
 0.654
ENSACIP00000014992
Phospholipase C, epsilon 1.
    
 
 0.637
ENSACIP00000003216
Neurexin 1.
   
 0.626
NRXN2
Neurexin 2.
   
 0.626
ENSACIP00000008694
Uncharacterized protein.
   
 0.626
ENSACIP00000008743
Neurexin 3b.
   
 0.626
ENSACIP00000016008
Uncharacterized protein.
   
 0.626
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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