STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001682Tumor necrosis factor receptor superfamily, member 11a, NFKB activator. (431 aa)    
Predicted Functional Partners:
ENSACIP00000009051
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
    
 0.999
ENSACIP00000027317
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.997
ENSACIP00000013761
TNF receptor-associated factor.
    
  0.973
ENSACIP00000020936
TNF receptor-associated factor.
    
  0.973
ENSACIP00000025236
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.973
ENSACIP00000022616
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.962
ENSACIP00000029422
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.962
ENSACIP00000024308
NADH:ubiquinone oxidoreductase complex assembly factor.
      
 0.727
ENSACIP00000016093
TNFR-Cys domain-containing protein.
    
 0.712
PDZRN4
PDZ domain containing ring finger 4.
    
  0.711
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.