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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001685DEF6 guanine nucleotide exchange factor a. (618 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.859
RANBP2
RAN binding protein 2.
    
 0.700
CDC42
Cell division cycle 42.
    
 0.671
ENSACIP00000025287
Uncharacterized protein.
    
 0.671
ENSACIP00000013550
Retinoblastoma binding protein 5.
    
 0.659
ENSACIP00000017789
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.653
ENSACIP00000005284
Receptor-interacting serine-threonine kinase 4.
    
  0.646
ENSACIP00000023643
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.646
ENSACIP00000015811
Nucleoporin 133.
    
 0.644
ENSACIP00000007887
Uncharacterized protein; Belongs to the adenylate kinase family.
    
  0.642
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.