Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001696THAP-type domain-containing protein. (360 aa)    
Predicted Functional Partners:
ENSACIP00000029179
Transcription factor.
   
 0.882
ENSACIP00000018742
Si:ch211-195d17.2.
     
  0.865
ENSACIP00000013724
Retinoblastoma-like 1 (p107).
   
 0.779
ENSACIP00000020012
Retinoblastoma 1.
   
 0.779
ENSACIP00000023919
Retinoblastoma-like 2 (p130).
   
 0.779
ENSACIP00000007680
Lin-54 DREAM MuvB core complex component.
    
 0.772
ENSACIP00000002164
Cyclin E2; Belongs to the cyclin family.
    
 0.757
ENSACIP00000011479
Cyclin E1; Belongs to the cyclin family.
    
 0.757
ENSACIP00000007311
Lin-9 DREAM MuvB core complex component.
    
 0.745
ENSACIP00000004062
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
    
 0.713
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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