STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001704C3H1-type domain-containing protein. (822 aa)    
Predicted Functional Partners:
ENSACIP00000008167
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
  0.625
ENSACIP00000007454
Optineurin.
    
  0.574
ENSACIP00000027728
TRAF family member-associated NFKB activator.
   
 
 0.503
ENSACIP00000001174
DED domain-containing protein.
     
 0.493
ENSACIP00000010602
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.493
ENSACIP00000025903
Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
     
 0.493
ENSACIP00000010194
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.475
NEDD8
NEDD8 ubiquitin like modifier.
    
 
 0.462
ENSACIP00000013316
THO complex 3.
      
 0.462
ENSACIP00000017388
Ubiquitin-like domain-containing protein.
    
 
 0.462
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.