Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001708DUF1604 domain-containing protein. (130 aa)    
Predicted Functional Partners:
ENSACIP00000023131
YJU2 splicing factor homolog.
    
 0.991
ENSACIP00000030632
SYF2 pre-mRNA-splicing factor.
    
 0.990
ENSACIP00000024341
WD repeat domain containing 83.
    
 
 0.987
ENSACIP00000018592
Pleiotropic regulator 1.
    
 
 0.980
ENSACIP00000030072
Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.
   
  0.978
ENSACIP00000006620
E2f-associated phosphoprotein.
    
   0.974
ENSACIP00000030892
Uncharacterized protein.
    
   0.974
ENSACIP00000009973
SDE2 telomere maintenance homolog (S. pombe).
    
 0.972
USB1
U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family.
    
   0.972
ENSACIP00000008100
Cell division cycle 40 homolog (S. cerevisiae).
    
  0.969
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.