STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001719Retinoid X receptor, alpha a. (430 aa)    
Predicted Functional Partners:
NR1H2
Nuclear receptor subfamily 1 group H member 2.
   
 0.986
ENSACIP00000031671
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.974
ENSACIP00000002282
Peroxisome proliferator-activated receptor delta b.
    
 0.963
ENSACIP00000000773
Nuclear receptor subfamily 1, group I, member 2.
    
 0.961
PPARG
Peroxisome proliferator activated receptor gamma.
    
 0.961
ENSACIP00000014054
Uncharacterized protein.
    
 0.949
ENSACIP00000025884
Nuclear receptor corepressor 2.
    
 0.949
ENSACIP00000000142
Nuclear receptor subfamily 1, group H, member 4.
   
 0.940
ENSACIP00000018888
Nuclear receptor subfamily 1, group H, member 5.
   
 0.940
ENSACIP00000014136
GPS2_interact domain-containing protein.
    
 0.933
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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