STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001730Tousled-like kinase 1a. (695 aa)    
Predicted Functional Partners:
ENSACIP00000007684
Anti-silencing function 1Ba histone chaperone.
    
 
 0.804
ASF1B
Anti-silencing function 1B histone chaperone.
    
 
 0.804
ENSACIP00000030974
MEF2_binding domain-containing protein.
    
 
 0.725
CABIN1
Calcineurin binding protein 1.
    
 
 0.725
ENSACIP00000009643
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 
 0.619
ENSACIP00000019188
Dynactin domain-containing protein.
      
 0.593
ENSACIP00000018072
Myelin basic protein b.
    
 
 0.567
YTHDC2
YTH domain containing 2.
    
   0.548
ENSACIP00000003419
Dynein light chain.
    
   0.541
DYNLL2
Dynein light chain.
    
   0.541
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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