STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001748Plexin b1b. (2158 aa)    
Predicted Functional Partners:
ENSACIP00000010695
Sema domain-containing protein.
    
 
0.901
ENSACIP00000028602
MET proto-oncogene, receptor tyrosine kinase.
    
 
0.901
ENSACIP00000012251
Neuropilin; Belongs to the neuropilin family.
    
 0.885
RND1
Rho family GTPase 1.
    
 0.878
ENSACIP00000000610
Rho family GTPase 1b.
    
 0.878
ENSACIP00000024167
Rho family GTPase 3a.
    
 0.878
SEMA4D
Semaphorin 4D; Belongs to the semaphorin family.
    
 0.877
ENSACIP00000018131
Sema domain-containing protein; Belongs to the semaphorin family.
    
 0.874
ENSACIP00000022402
Semaphorin 4e; Belongs to the semaphorin family.
    
 0.874
ENSACIP00000031555
Si:ch211-129c21.1; Belongs to the semaphorin family.
    
 0.874
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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