STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001779Si:dkey-19e4.5. (177 aa)    
Predicted Functional Partners:
ENSACIP00000028614
Cytochrome C oxidase assembly factor 5.
   
 
 0.786
ENSACIP00000029012
Cytochrome c oxidase assembly homolog 15 (yeast).
     
 0.766
ENSACIP00000010755
Cytochrome C oxidase assembly factor 3a.
   
 0.743
GATB
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
    
  0.683
ENSACIP00000005012
SCO cytochrome c oxidase assembly protein 2.
     
 0.656
ENSACIP00000026720
Cytochrome c oxidase assembly factor COX19.
   
 
 0.640
ENSACIP00000030036
Cytochrome c oxidase assembly homolog 11 (yeast).
     
 0.638
ENSACIP00000021474
Ubiquitin carboxyl-terminal hydrolase.
    
  0.616
ENSACIP00000008420
Cytochrome c oxidase copper chaperone COX17.
   
 
 0.613
COX5A
Cytochrome c oxidase subunit 5Ab.
   
 
 0.605
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.