Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001786Uncharacterized protein. (536 aa)    
Predicted Functional Partners:
ENSACIP00000024916
Retinoic acid induced 14.
   
 
 0.623
ENSACIP00000016239
Si:dkey-30c15.10.
    
   0.561
ENSACIP00000003833
Spectrin alpha, non-erythrocytic 1.
   
 
 0.528
ENSACIP00000019886
Transmembrane and coiled-coil domains 1.
      
 0.516
ENSACIP00000031192
Pejvakin.
     
 0.504
ENSACIP00000016995
Ankyrin repeat domain 24.
   
 
 0.472
ENSACIP00000025259
F-box domain-containing protein.
      
 0.461
ENSACIP00000011685
TACC_C domain-containing protein.
      
 0.460
ENSACIP00000024028
RPGRIP1 like.
    
 
 0.459
ENSACIP00000014059
Xin actin binding repeat containing 1.
     
 0.448
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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