STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM187AFamily with sequence similarity 187 member A. (398 aa)    
Predicted Functional Partners:
ENSACIP00000004126
Ribosomal protein S27a.
    
 0.742
ENSACIP00000014474
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.653
ENSACIP00000025696
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.653
ENSACIP00000029838
Ubiquitin-like domain-containing protein.
    
 0.653
ENSACIP00000015436
Thyroid hormone receptor interactor 12.
     
 0.649
ENSACIP00000013678
Ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
    
 0.623
ENSACIP00000019702
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.623
ENSACIP00000002660
Relaxin family peptide receptor 1.
    
 0.597
ENSACIP00000007031
Leucine-rich repeat containing G protein-coupled receptor 4.
    
 0.597
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.597
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.