Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM187AFamily with sequence similarity 187 member A. (398 aa)    
Predicted Functional Partners:
ENSACIP00000018421
UBX domain-containing protein 7.
    
 
 0.711
ENSACIP00000004126
Ribosomal protein S27a.
    
 0.610
ENSACIP00000022263
SEC63 homolog, protein translocation regulator.
    
 
 0.561
ENSACIP00000014474
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.538
ENSACIP00000025696
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.538
ENSACIP00000029838
Ubiquitin-like domain-containing protein.
    
 0.538
ENSACIP00000023153
Uncharacterized protein.
      
 0.535
HIGD1A
HIG1 hypoxia inducible domain family member 1A.
      
 0.535
ENSACIP00000002660
Relaxin family peptide receptor 1.
    
 0.527
ENSACIP00000007031
Leucine-rich repeat containing G protein-coupled receptor 4.
    
 0.527
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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