STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001802Uncharacterized protein. (220 aa)    
Predicted Functional Partners:
ENSACIP00000005724
Hydroxysteroid (17-beta) dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.794
ENSACIP00000006182
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.741
ENSACIP00000021545
tRNA methyltransferase 10A.
   
 0.690
ENSACIP00000028725
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 0.690
POP1
POP1 homolog, ribonuclease P/MRP subunit.
   
 
 0.641
ENSACIP00000023690
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
     
 0.636
ENSACIP00000002309
NADH:ubiquinone oxidoreductase complex assembly factor 6.
  
 
 0.621
ENSACIP00000008255
Uncharacterized protein.
  
    0.615
ENSACIP00000029489
Ribonuclease P/MRP 30 subunit.
   
 
 0.588
ENSACIP00000010734
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
     
 0.571
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.