Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ENSACIP00000001803PHD-type domain-containing protein. (954 aa)    
Predicted Functional Partners:
ENSACIP00000013550
Retinoblastoma binding protein 5.
    
 0.808
ENSACIP00000017789
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.801
ENSACIP00000018347
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
   
 0.682
ENSACIP00000010818
Uncharacterized protein.
   
 0.645
ENSACIP00000014300
Ash1 (absent, small, or homeotic)-like (Drosophila).
   
 0.645
ENSACIP00000027095
SET binding protein 1.
   
 0.645
ENSACIP00000019275
Uncharacterized protein.
   
 
 0.638
ENSACIP00000009289
Retinoic acid induced 1.
      
 0.637
ENSACIP00000012487
Zgc:91968.
      
 0.637
ENSACIP00000012645
PR domain containing 4.
   
 0.636
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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