STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001809Short stature homeobox 2. (301 aa)    
Predicted Functional Partners:
ENSACIP00000007298
T-box transcription factor 18.
   
 0.834
ENSACIP00000004448
Hyperpolarization activated cyclic nucleotide-gated potassium channel 4.
    
 
 0.679
ENSACIP00000022433
Cyclic nucleotide-binding domain-containing protein.
    
 
 0.679
ENSACIP00000028437
Si:ch211-263k4.2.
    
 
 0.679
ENSACIP00000024632
T-box transcription factor 5a.
    
 
 0.677
ENSACIP00000013175
T-box transcription factor 3b.
    
 
 0.676
ENSACIP00000024653
T-box transcription factor 3a.
    
 
 0.676
ENSACIP00000008882
T-box transcription factor 15.
   
 0.656
ENSACIP00000001813
NDK domain-containing protein.
    
   0.631
ENSACIP00000000127
BTG3 associated nuclear protein.
      
 0.617
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.