STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001818WD repeat domain 59. (953 aa)    
Predicted Functional Partners:
ENSACIP00000000715
DEP domain containing 5.
   
 0.999
ENSACIP00000006282
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
    
 0.999
ENSACIP00000012131
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
0.999
ENSACIP00000029058
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.999
ENSACIP00000029414
WD repeat domain 24.
    
0.999
ENSACIP00000030286
NPR3-like, GATOR1 complex subunit.
    
 0.999
ENSACIP00000023088
Si:ch211-125a15.1.
    
 0.992
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.991
ENSACIP00000017298
Integrin alpha FG-GAP repeat containing 2.
    
 0.991
ENSACIP00000022879
Kaptin (actin binding protein).
    
 0.991
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.