Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACIP00000001824IF rod domain-containing protein; Belongs to the intermediate filament family. (441 aa)    
Predicted Functional Partners:
ENSACIP00000013362
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 0.816
ENSACIP00000017578
INO80 complex subunit E.
   
 0.752
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.751
RANBP2
RAN binding protein 2.
    
 0.709
ENSACIP00000020580
Keratin 4; Belongs to the intermediate filament family.
   
 0.700
ENSACIP00000021273
Keratin 8; Belongs to the intermediate filament family.
   
 0.700
ENSACIP00000020430
Zgc:158846; Belongs to the intermediate filament family.
   
  0.665
ENSACIP00000007878
Cleavage and polyadenylation specific factor 1.
    
  0.656
ENSACIP00000011979
Cleavage and polyadenylation specificity factor subunit 2.
    
  0.629
ENSACIP00000011857
Cleavage and polyadenylation specific factor 4.
    
 0.628
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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