STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001855LHFPL tetraspan subfamily member 4a. (217 aa)    
Predicted Functional Partners:
ENSACIP00000003642
Protocadherin-related 15a.
    
 0.757
ENSACIP00000015886
Protocadherin-related 15b.
    
 0.757
TMC1
Transmembrane channel-like protein.
   
 0.638
ENSACIP00000004142
Si:dkey-15b23.3.
   
 0.638
ENSACIP00000024805
Transmembrane inner ear.
     
 0.599
GGT7
Gamma-glutamyltransferase 7.
   
   0.568
ENSACIP00000014538
Uncharacterized protein.
   
   0.568
ENSACIP00000002916
Calcium and integrin binding family member 2.
     
 0.558
CIB2
Calcium and integrin binding family member 2.
     
 0.558
ENSACIP00000010423
Calcium and integrin binding family member 3.
     
 0.558
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.