Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001857Uncharacterized protein. (578 aa)    
Predicted Functional Partners:
ENSACIP00000008142
Nuclear receptor binding SET domain protein 3.
    
 
 0.761
ENSACIP00000004961
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
    
 
 0.739
ENSACIP00000015697
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
    
 
 0.729
ENSACIP00000017700
HARE-HTH domain-containing protein.
   
 
 0.719
ENSACIP00000020810
E2F transcription factor 1.
    
 
 0.715
ENSACIP00000015293
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 
 0.710
ENSACIP00000015436
Thyroid hormone receptor interactor 12.
    
   0.702
ENSACIP00000023691
YEATS domain containing 4.
    
 
 0.692
ENSACIP00000019893
Transcription initiation factor TFIID subunit.
    
 
 0.674
ENSACIP00000003782
Histone H2A; Belongs to the histone H2A family.
    
 0.671
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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