Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001858Tubby-like protein; Belongs to the TUB family. (410 aa)    
Predicted Functional Partners:
ENSACIP00000008896
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.820
IFT122
Intraflagellar transport 122.
    
 0.807
ENSACIP00000013427
WD repeat domain 19.
    
 0.791
ENSACIP00000026791
Tetratricopeptide repeat domain 21B.
    
 0.764
ENSACIP00000014370
WD repeat-containing protein 35.
    
 0.758
ENSACIP00000009258
Polymerase (RNA) II (DNA directed) polypeptide G-like.
     
  0.691
ENSACIP00000000975
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
   0.613
IFT43
Intraflagellar transport 43.
    
 
 0.599
ENSACIP00000024733
Uncharacterized protein.
     
  0.577
ENSACIP00000028308
Ankyrin repeat domain 54.
    
   0.564
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.