STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001889RRM domain-containing protein. (70 aa)    
Predicted Functional Partners:
ENSACIP00000003287
Uncharacterized protein.
   
 0.991
ENSACIP00000010344
Serine and arginine rich splicing factor 1a.
   
 0.991
ENSACIP00000021186
RRM domain-containing protein.
   
 0.952
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.952
ENSACIP00000001551
Transformer 2 beta homolog.
   
 0.950
ENSACIP00000001659
Transformer 2 alpha homolog.
   
 0.950
ENSACIP00000021577
RRM domain-containing protein.
   
 0.950
ENSACIP00000006214
Serine and arginine rich splicing factor 7a.
   
 0.942
ENSACIP00000012681
Serine and arginine rich splicing factor 7b.
   
 0.942
ENSACIP00000020272
Serine and arginine rich splicing factor 9.
    
 0.935
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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