Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001914Uncharacterized protein. (510 aa)    
Predicted Functional Partners:
ENSACIP00000000353
RRM domain-containing protein.
   
 0.876
ENSACIP00000006766
Heterogeneous nuclear ribonucleoprotein K.
   
 0.858
ENSACIP00000019030
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.858
ENSACIP00000012828
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.780
ENSACIP00000015739
Uncharacterized protein.
   
 0.762
ENSACIP00000015757
Uncharacterized protein.
   
 0.762
ENSACIP00000010673
Heterogeneous nuclear ribonucleoprotein D.
   
 0.759
ENSACIP00000016642
Uncharacterized protein.
   
 0.759
ENSACIP00000022301
Heterogeneous nuclear ribonucleoprotein A/Ba.
   
 0.759
ENSACIP00000000568
Uncharacterized protein.
   
 0.747
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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