STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001918CDGSH iron sulfur domain 2. (135 aa)    
Predicted Functional Partners:
ENSACIP00000026665
Damage-specific DNA binding protein 1.
    
 
 0.846
ENSACIP00000015748
DET1 and DDB1 associated 1.
    
 
 0.692
DDA1
DET1 and DDB1 associated 1.
    
 
 0.692
ENSACIP00000009421
LEM domain containing 3.
    
 
 0.577
ENSACIP00000027318
RNA binding motif protein 39b.
    
 
 0.577
ENSACIP00000029644
Uncharacterized protein.
    
 
 0.577
ENSACIP00000030121
NADH:ubiquinone oxidoreductase subunit S5.
   
   0.518
ENSACIP00000031231
Uncharacterized protein.
   
  
 0.430
ENSACIP00000031233
Uncharacterized protein.
   
  
 0.430
ENSACIP00000017103
Cullin 4B; Belongs to the cullin family.
    
 
 0.417
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.