STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001933Si:dkey-34d22.1. (586 aa)    
Predicted Functional Partners:
ENSACIP00000026766
LMBR1 domain containing 1.
      
 0.742
ENSACIP00000012852
Melanocortin 2 receptor accessory protein 2b.
      
 0.642
ENSACIP00000017614
OMA1 zinc metallopeptidase.
      
 0.641
ENSACIP00000022004
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
      
 0.535
ENSACIP00000015647
Calcium regulated heat stable protein 1.
      
 0.501
ENSACIP00000015961
Nucleolar and spindle associated protein 1.
      
 0.472
ENSACIP00000000742
DCN1-like protein.
      
 0.470
ENSACIP00000012381
EF-hand domain (C-terminal) containing 1.
      
 0.467
ENSACIP00000024371
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
      
 0.457
B3GAT1
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
      
 0.447
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.