STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001934Transmembrane p24 trafficking protein 9. (222 aa)    
Predicted Functional Partners:
ENSACIP00000005616
Transmembrane p24 trafficking protein 10.
   
0.993
ENSACIP00000009636
Transmembrane p24 trafficking protein 2.
   
0.990
ENSACIP00000007237
Transmembrane p24 trafficking protein 7.
   
0.914
ENSACIP00000027164
Transmembrane p24 trafficking protein 3.
   
0.914
ENSACIP00000027503
Toll-like receptor adaptor molecule 1.
   
 0.914
ENSACIP00000006764
Uncharacterized protein.
   
 0.863
SURF4
Surfeit 4.
   
 0.863
ENSACIP00000000529
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.781
ENSACIP00000000195
SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family.
   
 0.779
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
   
 0.779
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.