STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001942Membrane-associated ring finger (C3HC4) 4. (420 aa)    
Predicted Functional Partners:
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 
 0.637
ENSACIP00000026807
CCR4-NOT transcription complex, subunit 2.
    
 
 0.637
ENSACIP00000011186
Fas (TNFRSF6) associated factor 1.
    
 
 0.636
ENSACIP00000021760
Fas associated factor family member 2.
    
 
 0.636
ENSACIP00000024551
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.580
ENSACIP00000018597
Zgc:136908.
    
 
 0.566
SPATA5
Spermatogenesis associated 5.
    
 
 0.566
ENSACIP00000025718
Spermatogenesis associated 5-like 1.
    
 
 0.566
ENSACIP00000026468
Valosin containing protein; Belongs to the AAA ATPase family.
    
 
 0.566
ENSACIP00000016838
Ubiquitin-conjugating enzyme E2Q family-like 1.
      
 0.554
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.