STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001965Jagunal homolog 1b. (183 aa)    
Predicted Functional Partners:
ENSACIP00000012459
Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.
      
 0.853
ENSACIP00000020115
Uncharacterized protein.
      
 0.798
ENSACIP00000030812
Uncharacterized protein.
     
  0.752
ENSACIP00000030839
Uncharacterized protein.
     
  0.752
ENSACIP00000017840
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]
   
   0.741
ENSACIP00000028149
Plug_translocon domain-containing protein.
    
 
 0.689
SCAMP2
Secretory carrier-associated membrane protein.
   
 
 0.675
ENSACIP00000017354
Secretory carrier-associated membrane protein.
   
 
 0.675
ENSACIP00000021834
DnaJ heat shock protein family (Hsp40) member C21.
      
 0.639
VPS13B
Vacuolar protein sorting 13 homolog B.
      
 0.635
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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