Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001997Sema domain-containing protein. (1035 aa)    
Predicted Functional Partners:
ENSACIP00000012251
Neuropilin; Belongs to the neuropilin family.
    
 0.862
ENSACIP00000001748
Plexin b1b.
    
 0.760
ENSACIP00000006124
Plexin B3.
    
 0.760
ENSACIP00000021707
Plexin b1a.
    
 0.760
ENSACIP00000002472
Plexin b2b.
    
 0.706
ENSACIP00000007128
Sema domain-containing protein.
    
 0.706
ENSACIP00000030884
Plexin_cytopl domain-containing protein.
    
 0.655
ENSACIP00000003268
Asparagine synthetase.
      
 0.636
ENSACIP00000003547
Nei-like DNA glycosylase 1.
      
 0.636
ENSACIP00000001784
Plexin A1a.
    
 0.621
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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