STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
OTUD7AOTU deubiquitinase 7A. (777 aa)    
Predicted Functional Partners:
ENSACIP00000004126
Ribosomal protein S27a.
    
  0.903
ENSACIP00000016386
Glutaredoxin 5 homolog (S. cerevisiae).
      
 0.876
ENSACIP00000010389
Uncharacterized protein.
    
  0.847
ENSACIP00000016396
PRKR interacting protein 1.
    
 
 0.814
ENSACIP00000014189
NFS1 cysteine desulfurase.
    
 
 0.812
ENSACIP00000005284
Receptor-interacting serine-threonine kinase 4.
   
 0.798
ENSACIP00000027317
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.795
ENSACIP00000015436
Thyroid hormone receptor interactor 12.
   
 
 0.793
ENSACIP00000014474
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.776
ENSACIP00000025696
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.776
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.