STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTUD7AOTU deubiquitinase 7A. (777 aa)    
Predicted Functional Partners:
ENSACIP00000004126
Ribosomal protein S27a.
   
  0.905
ENSACIP00000010389
Uncharacterized protein.
   
  0.899
ENSACIP00000018421
UBX domain-containing protein 7.
   
   0.868
ENSACIP00000011967
TNFAIP3 interacting protein 1.
    
 0.828
ENSACIP00000005284
Receptor-interacting serine-threonine kinase 4.
   
 0.822
ENSACIP00000014474
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.795
ENSACIP00000025696
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.795
ENSACIP00000029838
Ubiquitin-like domain-containing protein.
    
  0.785
ENSACIP00000027317
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.765
ENSACIP00000022385
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
 0.712
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.