STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000002006VWFA domain-containing protein. (251 aa)    
Predicted Functional Partners:
ENSACIP00000013754
Collagen, type VI, alpha 1.
   
0.982
ENSACIP00000002045
Uncharacterized protein.
 
      0.872
ENSACIP00000019197
Integrin, alpha 1; Belongs to the integrin alpha chain family.
   
 
 0.852
ENSACIP00000023023
Integrin beta; Belongs to the integrin beta chain family.
    
 0.850
ENSACIP00000025444
Integrin beta.
    
 0.849
ENSACIP00000012306
Integrin beta; Belongs to the integrin beta chain family.
    
 0.848
ENSACIP00000026289
Integrin beta; Belongs to the integrin beta chain family.
    
 0.848
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
   
 0.843
ENSACIP00000001653
Integrin, alpha 3b; Belongs to the integrin alpha chain family.
   
 0.842
ENSACIP00000010278
Integrin, alpha 10; Belongs to the integrin alpha chain family.
   
 
 0.842
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.